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Michael Menzel
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1eb4c390
Commit
1eb4c390
authored
Oct 29, 2018
by
Michael Menzel
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fixed batch start without cell line independent annotation
parent
8cbbe0bd
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-1
backend/src/main/java/de/thm/run/AnalysisHelper.java
backend/src/main/java/de/thm/run/AnalysisHelper.java
+2
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backend/src/main/java/de/thm/run/AnalysisHelper.java
View file @
1eb4c390
...
...
@@ -97,7 +97,7 @@ class AnalysisHelper {
private
ResultCollector
runAnalysis
(
Sites
sites
,
BackendCommand
cmd
)
throws
CovariatesException
,
NoTracksLeftException
{
List
<
Track
>
covariants
=
getCovariants
(
cmd
.
getCovariants
(),
cmd
.
getAssembly
());
final
Sites
[]
bg
=
new
Sites
[
1
];
Double
smooth
=
1
0
d
;
//cmd.getInfluence(); //TODO use user defined value
Double
smooth
=
0
d
;
//cmd.getInfluence(); //TODO use user defined value
int
minSites
=
cmd
.
getMinBg
();
ExecutorService
pool
=
Executors
.
newFixedThreadPool
(
1
);
...
...
@@ -237,6 +237,7 @@ class AnalysisHelper {
tracks
=
tracks
.
stream
().
filter
(
distinctByKey
(
Track:
:
getName
)).
collect
(
Collectors
.
toList
());
for
(
Sites
sites
:
batchSites
)
{
try
{
results
.
addResult
(
runAnalysisWithBg
(
sites
,
bg
,
tracks
,
false
));
}
catch
(
NoTracksLeftException
e
)
{
...
...
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